Walking While Asking:Lessons from Agroecology Education in Chiapas, Mexico

Keller, Kate, M.S., December 2019 Environmental Studies Walking While Asking: Lessons from Agroecology Education in Chiapas, Mexico Committee Chairperson: Dr. Neva Hassanein This professional paper presents an assessment of the most recent project of Schools for Chiapas (SfC), a U.S.-based solidarity organization working in collaboration with the Zapatista autonomous communities in Chiapas, Mexico. It examines the challenges and potentials of SfC’s efforts to implement food forests at 16 autonomous secondary schools. I contextualize this work within a larger conversation amongst food sovereignty activists and scholars around efforts to scale-out the use of agroecology through education. As the organization looks to continue its efforts in a similar vein, this paper analyzes potential for advancement in this area. The Zapatistas, an insurgent movement of indigenous Mayan peasant communities, have spent the last 26 years establishing autonomous systems of governance, health, education and agroecological production. For the Zapatistas, as for rural movements throughout Latin America, agroecology plays an essential role in the cultural continuity and autonomy of rural communities, drawing on traditional local knowledge to sustain healthful food systems within the capacity of the land. Movements within the global alliance of La Via Campesina see agroecology as the tool by which they enact their demand for food sovereignty and “social relations free of oppression and inequality.” As such, efforts to extend critical theory and practices of agroecology through education are vital to strengthening their movements and defending indigenous and rural livelihoods and cultures. Scholars and activists within these movements document and analyze the pedagogical practices of these efforts. My analysis draws on in-depth interviews with founders, staff and volunteers of Schools for Chiapas, as well as two other examples in Chiapas of efforts to “scale-out” agroecology through education. My own observations of the food forest initiative (FFI) during a 6-week internship and subsequent employment with SfC also offer personal experiences through which I interpret the execution of the FFI. This paper describes and analyses these experiences and conversations in order to glean lessons that might inform SfC’s future efforts. Though Schools for Chiapas’ relationship with Zapatista autonomy is unique, my conclusions are concurrent with themes in agroecological education in other movements

Methanotrophic bacterial symbionts fuel dense populations of deep-sea feather duster worms (Sabellida, Annelida) and extend the spatial influence of methane seepage

Deep-sea cold seeps are dynamic sources of methane release and unique habitats supporting ocean biodiversity and productivity. Here, we describe newly discovered animal-bacterial symbioses fueled by methane, between two species of annelid (a serpulid Laminatubus and sabellid Bispira) and distinct aerobic methane-oxidizing bacteria belonging to the Methylococcales, localized to the host respiratory crown. Worm tissue δ¹³C of −44 to −58‰ are consistent with methane-fueled nutrition for both species, and shipboard stable isotope labeling experiments revealed active assimilation of ¹³C-labeled methane into animal biomass, which occurs via the engulfment of methanotrophic bacteria across the crown epidermal surface. These worms represent a new addition to the few animals known to intimately associate with methane-oxidizing bacteria and may further explain their enigmatic mass occurrence at 150–million year–old fossil seeps. High-resolution seafloor surveys document significant coverage by these symbioses, beyond typical obligate seep fauna. These findings uncover novel consumers of methane in the deep sea and, by expanding the known spatial extent of methane seeps, may have important implications for deep-sea conservation

Methanotrophic bacterial symbionts fuel dense populations of deep-sea feather duster worms (Sabellida, Annelida) and extend the spatial influence of methane seepage

Deep-sea cold seeps are dynamic sources of methane release and unique habitats supporting ocean biodiversity and productivity. Here, we describe newly discovered animal-bacterial symbioses fueled by methane, between two species of annelid (a serpulid Laminatubus and sabellid Bispira) and distinct aerobic methane-oxidizing bacteria belonging to the Methylococcales, localized to the host respiratory crown. Worm tissue δ¹³C of −44 to −58‰ are consistent with methane-fueled nutrition for both species, and shipboard stable isotope labeling experiments revealed active assimilation of ¹³C-labeled methane into animal biomass, which occurs via the engulfment of methanotrophic bacteria across the crown epidermal surface. These worms represent a new addition to the few animals known to intimately associate with methane-oxidizing bacteria and may further explain their enigmatic mass occurrence at 150–million year–old fossil seeps. High-resolution seafloor surveys document significant coverage by these symbioses, beyond typical obligate seep fauna. These findings uncover novel consumers of methane in the deep sea and, by expanding the known spatial extent of methane seeps, may have important implications for deep-sea conservation

ALMA reveals a stable rotating gas disk in a paradoxical low-mass, ultra-dusty galaxy at z = 4.274

We report ALMA detections of [CII] and dust continuum in Az9, a multiply-imaged galaxy behind the Frontier Field cluster MACSJ0717.5+3745. The bright [CII] emission line provides a spectroscopic redshift of z = 4.274. This strongly lensed (mu = 7 +/- 1) galaxy has an intrinsic stellar mass of only 2e9 Msun and a total star formation rate of 26 Msun/yr (~80% of which is dust obscured). Using public magnification maps, we reconstruct the [CII] emission in the source plane to reveal a stable, rotation-dominated disk with V/sigma = 5.3, which is > 2x higher than predicted from simulations for similarly high-redshift, low-mass galaxies. In the source plane, the [CII] disk has a half-light radius of 1.8 kpc and, along with the dust, is spatially offset from the peak of the stellar light by 1.4 kpc. Az9 is not deficient in [CII]; L[CII]/LIR = 0.0027 consistent with local and high redshift normal star forming galaxies. While dust-obscured star formation is expected to dominate in higher mass galaxies, such a large reservoir of dust and gas in a lower mass disk galaxy 1.4 Gyr after the Big Bang challenges our picture of early galaxy evolution. Furthermore, the prevalence of such low-mass dusty galaxies has important implications for the selection of the highest redshift dropout galaxies with JWST. As one of the lowest stellar mass galaxies at z > 4 to be detected in dust continuum and [CII], Az9 is an excellent laboratory in which to study early dust enrichment in the interstellar medium.Comment: Accepted for publication in ApJ Letter

Genetic mapping of microbial and host traits reveals production of immunomodulatory lipids by Akkermansia muciniphila in the murine gut.

The molecular bases of how host genetic variation impacts the gut microbiome remain largely unknown. Here we used a genetically diverse mouse population and applied systems genetics strategies to identify interactions between host and microbe phenotypes including microbial functions, using faecal metagenomics, small intestinal transcripts and caecal lipids that influence microbe-host dynamics. Quantitative trait locus (QTL) mapping identified murine genomic regions associated with variations in bacterial taxa; bacterial functions including motility, sporulation and lipopolysaccharide production and levels of bacterial- and host-derived lipids. We found overlapping QTL for the abundance of Akkermansia muciniphila and caecal levels of ornithine lipids. Follow-up in vitro and in vivo studies revealed that A. muciniphila is a major source of these lipids in the gut, provided evidence that ornithine lipids have immunomodulatory effects and identified intestinal transcripts co-regulated with these traits including Atf3, which encodes for a transcription factor that plays vital roles in modulating metabolism and immunity. Collectively, these results suggest that ornithine lipids are potentially important for A. muciniphila-host interactions and support the role of host genetics as a determinant of responses to gut microbes

Differential Expressed Genes Identified Between African American and European American Keloid Fibroblasts

Keloids are benign fibroproliferative tumors due to dysregulation of collagen remodeling and abnormal wound healing. Although worldwide, there is a higher incidence of keloid disease (KD) in skin of color, little is known about this predisposition. In this study, we used one tissue micro array slide comprised of six AA and 6 EA punch biopsies of primary untreated keloid tissue from the head and neck area was created, following the NanoString® DSP Technology Access Program protocol. The GeoMx Human Whole Transcriptome Atlas Assay was performed, using morphology marker FAP. Polygonal region of interests selection strategy for Fibroblast Activation Protein (FAP) positive cells was conducted. Univariate analysis was performed, using linear regression models to identify differentially expressed genes (DEG) at a false discovery rate (FDR) of 0.05. Ingenuity pathway analysis (IPA) software was used to determine DEG pathway enrichment. 1,450 DEG were identified (p-va

Systematic Analysis of Cell Cycle Effects of Common Drugs Leads to the Discovery of a Suppressive Interaction between Gemfibrozil and Fluoxetine

Screening chemical libraries to identify compounds that affect overall cell proliferation is common. However, in most cases, it is not known whether the compounds tested alter the timing of particular cell cycle transitions. Here, we evaluated an FDA-approved drug library to identify pharmaceuticals that alter cell cycle progression in yeast, using DNA content measurements by flow cytometry. This approach revealed strong cell cycle effects of several commonly used pharmaceuticals. We show that the antilipemic gemfibrozil delays initiation of DNA replication, while cells treated with the antidepressant fluoxetine severely delay progression through mitosis. Based on their effects on cell cycle progression, we also examined cell proliferation in the presence of both compounds. We discovered a strong suppressive interaction between gemfibrozil and fluoxetine. Combinations of interest among diverse pharmaceuticals are difficult to identify, due to the daunting number of possible combinations that must be evaluated. The novel interaction between gemfibrozil and fluoxetine suggests that identifying and combining drugs that show cell cycle effects might streamline identification of drug combinations with a pronounced impact on cell proliferation

Global simulation of tropospheric chemistry at 12.5 km resolution : Performance and evaluation of the GEOS-Chem chemical module (v10-1) within the NASA GEOS Earth system model (GEOS-5 ESM)

We present a full-year online global simulation of tropospheric chemistry (158 coupled species) at cubed-sphere c720 ( ∼ 12.5×12.5 km2) resolution in the NASA Goddard Earth Observing System Model version 5 Earth system model (GEOS-5 ESM) with GEOS-Chem as a chemical module (G5NR-chem). The GEOS-Chem module within GEOS uses the exact same code as the offline GEOS-Chem chemical transport model (CTM) developed by a large atmospheric chemistry research community. In this way, continual updates to the GEOS-Chem CTM by that community can be seamlessly passed on to the GEOS chemical module, which remains state of the science and referenceable to the latest version of GEOS-Chem. The 1-year G5NR-chem simulation was conducted to serve as the Nature Run for observing system simulation experiments (OSSEs) in support of the future geostationary satellite constellation for tropospheric chemistry. It required 31 wall-time days on 4707 compute cores with only 24 % of the time spent on the GEOS-Chem chemical module. Results from the GEOS-5 Nature Run with GEOS-Chem chemistry were shown to be consistent to the offline GEOS-Chem CTM and were further compared to global and regional observations. The simulation shows no significant global bias for tropospheric ozone relative to the Ozone Monitoring Instrument (OMI) satellite and is highly correlated with observations spatially and seasonally. It successfully captures the ozone vertical distributions measured by ozonesondes over different regions of the world, as well as observations for ozone and its precursors from the August-September 2013 Studies of Emissions, Atmospheric Composition, Clouds and Climate Coupling by Regional Surveys (SEAC4RS) aircraft campaign over the southeast US. It systematically overestimates surface ozone concentrations by 10 ppbv at sites in the US and Europe, a problem currently being addressed by the GEOS-Chem CTM community and from which the GEOS ESM will benefit through the seamless update of the online code

Biosynthetic Gene Cluster for the Cladoniamides, Bis-Indoles with a Rearranged Scaffold

The cladoniamides are bis-indole alkaloids isolated from Streptomyces uncialis, a lichen-associated actinomycete strain. The cladoniamides have an unusual, indenotryptoline structure rarely observed among bis-indole alkaloids. I report here the isolation, sequencing, and annotation of the cladoniamide biosynthetic gene cluster and compare it to the recently published gene cluster for BE-54017, a closely related indenotryptoline natural product. The cladoniamide gene cluster differs from the BE-54017 gene cluster in gene organization and in the absence of one N-methyltransferase gene but otherwise contains close homologs to all genes in the BE-54017 cluster. Both gene clusters encode enzymes needed for the construction of an indolocarbazole core, as well as flavin-dependent enzymes putatively involved in generating the indenotryptoline scaffold from an indolocarbazole. These two bis-indolic gene clusters exemplify the diversity of biosynthetic routes that begin from the oxidative dimerization of two molecules of l-tryptophan, highlight enzymes for further study, and provide new opportunities for combinatorial engineering